ELIXIR CZ Annual Conference 2024: Data management

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The ninth ELIXIR CZ annual conference.

Data management is becoming an increasingly vital part of modern research, and this conference is here to help you navigate it with ease. Over three days, more than 20 experts will guide us through the world of data management, from its role in EU projects to its impact on everyday scientific work. You’ll discover the tools that simplify data management and explore best practices tailored to the needs of the scientific community. Plus, we’ll dive into how data management is being handled on a national level. Get ready to enhance your research with practical insights and solutions!

Programme

Wednesday, 9 October

DM in EU context

Chairman: Jiří Vondrášek

12:00 – 13:00     Registration, Vila Lanna

13:00 – 13:10     Welcome word by Jiří Vondrášek, Head of ELIXIR CZ

13:10 – 13:50     Data Management Community – towards standardized approach across
                                     EU countries, infrastructures and project
                                     Niclas Jareborg, National Bioinformatics Infrastructure Sweden
13:50 – 14:30     Data management in national and EU context from funding providers point of view
                                     Petr Baldrian, Czech Science Foundation
14:30 – 15:10     Data Management Support through the ELIXIR Compute Platform
                                     Matej Antol, Masaryk University
 
15:10 – 15:45     Coffee break
 
15:45 – 16:25      Data management from HPC point of view – towards AI solution
                                     Jan Martinovič, VSB – Technical University of Ostrava, IT4Innovations
16:25 – 17:05      EIRENE CZ & ELIXIR CZ cooperations for data management
                                     Elliott Price, Recetox Brno, Masaryk University
17:05 – 17:45      Implementing Data Management in Academic Institutions Using ELIXIR Services and Resources
                                     Jiří Vondrášek – Institute of Organic Chemistry and Biochemistry of the CAS
 
17:45 – 19:00     Dinner
19:00 – 22:00     Poster session
 

Thursday, 10 October

Tools, Workflows

Chairman: Radka Svobodová

9:00 – 9:35           A Comprehensive Approach to Data Management Planning using DSW
                                    Marek Suchánek, Robert Pergl, Czech Technical University in Prague
9:35 – 9:50           Software Management Planning with DSW
                                     Marek Suchánek, Czech Technical University in Prague
9:50 – 10:10        Onedata for comprehensive management of distributed scientific data
                                     Łukasz Opioła, ACC Cyfronet AGH, Krakow

10:10 – 10:40      Coffee break

10:40 – 10:55     iRODS as a solution for distributed data management
                                     Martin Golasowski, VSB – Technical University of Ostrava
10:55 – 11:15     Electronic laboratory notebooks in theory and praxis
                                     Marek Cebecauer, J. Heyrovský Institute of Physical Chemistry
11:15 – 11:30     Tools for Public Data Management in Galaxy Project’s Ecosystem
                                     Martin Čech, Institute of Organic Chemistry and Biochemistry of the CAS

11:30 – 13:00     Lunch time

Community, Best Practice

Chairman: Karel Berka

13:00 – 13:05     Introduction to community best practices
                                     Karel Berka, Palacký University Olomouc
13:05 – 13:25     Molecular Biophysics Database of raw data – MBDB
                                     Jan Dohnálek, Institute of Biotechnology CAS, v. v. i.
13:25 – 13:45     From Need to Practice: Data Stewardship at UCT Prague
                                     Martin Schätz, University of Chemistry and Technology, Prague
13:45 – 14:05     A Few Glimpses into Data Management at Masaryk University
                                     Michal Růžička, Masaryk University
14:05 – 14:25      Sequencing Data Management: Specifics, Applications, and European Initiatives
                                     Vojtěch Bystrý, Masaryk University, CEITEC
14:25 – 14:45     SIP – platform for management of the scientific data life-cycle and its implementation
                                     in mid-sized cryo-EM service laboratory
                                     Jiří Nováček, Masaryk University, CEITEC
14:45 – 15:00     FAIR Molecular Dynamics
                                     Adrian Rošinec, Masaryk University

15:00 – 15:45     Coffee break

15:45 – 16:00     Data managenet at CENAKVA LRI.
                                     Jaromír Kovárník, University of South Bohemia in České Budějovice
16:00 – 16:20     Clinical data towards multiomics
                                     Petr Pavliš, Palacký University Olomouc
16:20 – 16:40     GlobalFungi and GlobalAMFungi Databases: Powerful tools for in-depth exploration
                                     of fungal ecology and biogeography
                                     Tomáš Větrovský, Institute of Microbiology of the CAS, v. v. i.
16:40 – 17:00     Data Management of Biological Imaging Data
                                     Tomáš Svoboda, Masaryk University
17:00 – 18:00     Panel discussion on DM best practices
                                     Karel Berka, Palacký University Olomouc

18:00 – 22:00     Social event – Bowling Dejvice

 

Friday, 11 October

NRP, EOSC, OS II

Chairman: Marek Suchánek

09:00 – 09:25      EOSC CZ & Open Science Activities in the Czech Republic
                                     Jiří Marek, Masaryk University
09:25 – 09:45      National Repository Platform as the data infrastructure for FAIR data management
                                     Luděk Matyska, Masaryk University
09:45 – 10:05      NRP: Services for Users – Academic Institutions and Individual Scientists and Researchers
                                     Michal Růžička, Masaryk University, CERIT-SC
10:05 – 10:15      Data Stewardship Wizard: from Pilot’s Checklist to a Full Cockpit
                                     Marek Suchánek, Robert Pergl, Czech Technical University in Prague

10:15 – 10:45      Coffee break

10:50 – 11:15      What’s a Data Steward, Precious?
                                     Dagmar Hanzlíková, Charles University
11:15 – 11:30      Open Science II
                                     Jitka Baťková, Charles University

12:00                         Farewell

Registration

Registration is closed. The conference is limited to 80 participants.

Presentations and posters

Please indicate your interest in poster presentation in the registration form.
 
Topic – Interoperability, Data, FAIR Principles, Data life cycle, Data Workflow, Data management on Institutions.

 

Deadlines:

  • Please submit your abstract by email to elixir@uochb.cas.cz by midday 30 September at the latest.
  • Registration is open till 30 September.
 
 
The required poster format: A0, 841 mm (width) x 1189 mm (height).

Conference booklet

Official version of the conference booklet.

Conference costs and accommodation

No registration fee is required. We recommend the following accommodation facilities:
 
 
 
Hotel DAP***
 
Masarykova kolej

Venue

Please make your own travel arrangements to the venue.
 
Vila Lanna
V Sadech 1
160 00 Praha 6 – Bubeneč
 
Reservation – reception:
Phone: +420 224 321 278

Organizers

Jiří Vondrášek
Head of ELIXIR CZ
Phone: +420 220 183 267
E-mail: jiri.vondrasek@uochb.cas.cz
 
Anna Strachotová
Project Manager ELIXIR CZ
Phone : +420 220 183 201
E-mail : anna.strachotova@uochb.cas.cz
    

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