Location and basic characterization of channels in molecular structures.

MOLE PyMOL plugin

Plugin for MOLE 2.0 contains extended options for channel starting point automatic detection, for filtering of obtained channels to select only the relevant channels and allows estimation of basic physicochemical properties of channels.


A comprehensive resource of channels, pores and tunnels found in biomacromolecular structures deposited in the Protein Data Bank.

MOLEonline 2.0

Analysis of access/egress paths to biomolecular channels. A 3D graphical representation of the channel is displayed along with a list of lining residues and biochemical properties.


Provides a direct access to MOLE functionality and enables on-line and easy-to-use interactive channel analysis.