ELIXIR CZ Projects

ELIXIR CZ is based on the project funding at both national and European level.

Ministry of Education, Youth and Sports, Czech Republic

ID: LM2018131
Time frame: 1.1.2020 – 31.12.2022
Total budget: 146 845 000 CZK

ID: LM2015047
Period: 1.1.2016 – 31.12.2019
Amount granted: 118 042 000 CZK

Czech National Infrastructure for Biological data (ELIXIR CZ)
The aim of the project is to ensure that the data generated by other infrastructures meets the FAIR principles – findable, accessible, interoperable and reusable. ELIXIR CZ provides hardware and software resources and specific architectures according to the nature of processed data. This unique technical solution is primarily fulfilled by e-infrastructures responsible for advanced IT solutions, building data storage, access to data and computing capacities. 

ID: 16_013/0001777_01
Time frame: 1.5.2017 – 30.4.2021
Total budget: 65 111 100 CZK

ELIXIR CZ: Capacity Building
This project strengthened the infrastructure with several thousand computing cores, resulting up to 2 penta bytes of storage capacity, and allowed direct extension of several excellent databases and tools developed by ELIXIR CZ, such as RepeatExplorer, Dolbico, DNATCO, MotiveValidator, ValidatorDB or SecStructureAnnotator. These services became integral part of the international ELIXIR ecosystem and are fully available to all life science researchers .

European Union´s Framework Program for Research and Innovation Horizon 2020

ID: 871075
Time frame: 1.2.2020 – 31.1.2023
Budget:  154 575 EUR

ELIXIR-CONVERGE
This international project focuses on standardization of life science data management across Europe. To achieve this uneasy and complex goal, a unique data management toolkit dedicated to life scientists will be developed within the project. The toolkit will help ensure more research data is in the public domain, which will give scientists access to more data. This will allow them to discover new insights into the challenges facing society, such as food security and health in old age, and help stimulate innovation in biomedicine and biotechnology.

ID: 676559
Time frame: 1.9.2015 – 31.8.2019
Budget:  803 750 EUR

ELIXIR-EXCELERATE
The EXCELERATE project helped ELIXIR to coordinate and extend national and international data resources to ensure the delivery of world-leading life-science data services. It supported a pan-European training program, anchored in national infrastructures, to increase bioinformatics capacity and competency. It also provided efficiencies in management and operation throughout the infrastructure, which was distributed among 17 countries.

ELIXIR Commissioned Services

ELIXIR’s Commissioned Services are technical projects that guide future service development, drive standards adoption and connect ELIXIR Nodes

Scalable Curation (link)

Registry of bioinformatics tool information and identifiers (link)

Performance benchmarking and technical monitoring (link)

Literature-Data Integration (link)

Interoperability with a Purpose (link)

Identity and Access Management (link)

Expanding the Galaxy: meeting (the needs of) ELIXIR Communities (link)

ELIXIR Hybrid Cloud (link)

ELIXIR Federated Human Data (2019-21) (link)

Container Orchestration (link)

Comparison, benchmarking and dissemination of proteomics data analysis pipelines (link)

Capacity Building (link)

3D-BioInfo Community Implementation Study (link)

Making container services integratable, sustainable and widely used (link)

Strengthen Data Management in Galaxy (link)

Standardizing Intrinsically Disordered Proteins (IDPs) data (link)

Increasing the translational value of public proteomics datasets: Automatic metadata-driven reanalysis in cloud infrastructures (link)

Duration: 1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 May 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2019 to 30 November 2021

Duration:  1 June 2019 to 31 December 2021

Duration:  1 June 2020 to 31 May 2022

Duration:  1 June 2021 to 31 May 2023

Duration:  1 June 2021 to 31 May 2023

Duration: 1 January 2021 to 31 December 2022

Duration:  1 June 2021 to 31 May 2023

 

ELIXIR Staff/Knowledge Exchange

The aim of the ELIXIR Staff Exchange programme are to strengthen the links between ELIXIR Nodes, facilitate capacity building in ELIXIR Nodes and support the exchange of best practices in bioinformatics service provision.

ELIXIR CZ Internal Projects

ELIXIR CZ internal projects are short, 1-year long projects that enhance the ELIXIR CZ infrastructure. The projects are funded from the ELIXIR CZ budget and only ELIXIR CZ consortium partners can apply for it. Topics of interest are set by ELIXIR CZ Board.