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SUMMARY:Spatial Omics Data Analysis
UID:https://www.elixir-czech.cz/news/spatial-omics-data-analysis-uppsala-sweden-2026
LOCATION:
DTSTAMP:20261006T090000
DTSTART;TZID=Europe/Prague:20261006T090000
DTEND;TZID=Europe/Prague:20261009T130000
DESCRIPTION:This course delves into the cutting-edge field of Spatial Omics, focusing
on Spatially-Resolved Transcriptomics (SRT) technology which provides
unprecedented insights into the spatial organization of gene expression
within tissues. The rapid and recent advances in SRT technology are
transforming our understanding of biological systems, and this course is
designed to equip researchers with the tools to harness the power of SRT,
adding significant value to biological knowledge and opening new avenues
for scientific discovery.Participants will explore both imaging-based and
sequencing-based SRT technologies, learning to navigate the entire workflow
of SRT data analysis. The course covers essential topics such as
pre-processing techniques for data cleaning, normalization, and quality
control, methods for identifying and characterizing spatial domains within
tissues, strategies for integrating SRT data with single-cell RNA
sequencing data, and statistical approaches to analyze spatial patterns and
relationships. Additionally, participants will investigate interactions
between cells within their spatial context. By the end of this course,
participants will be equipped with the knowledge and skills to construct a
complete workflow for SRT data analysis, from raw data to meaningful
biological insights. The course combines lectures with practical sessions,
ensuring a balanced approach to theory and hands-on experience.This is an
international course hosted by NBIS (ELIXIR-SE) in collaboration with the
ELIXIR Single-Cell Omics community and other ELIXIR nodes.More info at
https://elixir-europe-training.github.io/ELIXIR-SCO-spatial-omics-2026 or
https://tess.elixir-europe.org/events/spatial-omics-data-analysis-5c751c88-b55f-43f5-8d20-eda6fa780993
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