3D Protein Services

All ELIXIR CZ Services for studies on protein structures.

3D Protein Services

Tools

 MOLE

MOLE

identification of channels and pores with automatic start point detection

Palacký University OlomoucMasaryk UniversityCEITEC Highly Accessed Service
 CAVER

Caver

Identification of channels in assemblies and protein structures

Masaryk UniversityUniversity Hospital at Saint Anna in Brno, FNUSA – ICRC Highly Accessed Service
 HotSpot Wizard

HotSpot Wizard

Prediction of hot spots for protein engineering

Masaryk UniversityUniversity Hospital at Saint Anna in Brno, FNUSA – ICRC Published Service
WebChemistry

ChargeCalculator

calculation of structure-specific partial atomic charges on proteins

Masaryk UniversityCEITEC Published Service
WebChemistry

MotiveValidator

validation of ligands and residues in structures

Masaryk UniversityCEITEC Published Service
WebChemistry

SiteBinder

superimposition of protein fragments

Masaryk UniversityCEITEC Published Service
WebChemistry

MotiveQuery

language for quick detection and extraction of protein fragments

Masaryk UniversityCEITEC Running service
Not yet available logo

PumpProbe

Protein allostery modelling

University of Chemistry and Technology, Prague Not yet available - service in preparation

Databases

WebChemistry

ValidatorDB

validation of structure for all residues and ligands

Masaryk UniversityCEITEC Running service
Not yet available logo

IESCA

Interaction Energy Side Chain Atlas

Institute of Organic Chemistry and Biochemistry of the CAS Not yet available - service in preparation